Transcript: LRRC45-001 OTTHUMT00000442058.1

Description

leucine rich repeat containing 45

Location

About this transcript

This transcript has 17 exons and is annotated with 24 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRRC45-001	OTTHUMT00000442058.1	2701	670aa	OTTHUMP00000259472	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11797	Q96CN5
LRRC45-003	OTTHUMT00000442060.3	730	6aa	OTTHUMP00000259473	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRRC45-005	OTTHUMT00000442062.1	1145	188aa	OTTHUMP00000259474	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRC45-002	OTTHUMT00000442059.1	840	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LRRC45-004	OTTHUMT00000442061.1	1289	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LRRC45-006	OTTHUMT00000442063.1	527	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 2,701 bps Translation length: 670 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11797

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 16/01/2012)

Alternative symbols

RP11-1182P23.2-001

Other assemblies

This transcript maps to 82,023,302-82,031,151 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000306688

Curation Method

Manual annotation from Havana