Transcript: TMEM106A-002 OTTHUMT00000453469.1

Description

transmembrane protein 106A

Location

Chromosome 17: 43,211,875-43,218,265 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000180879 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TMEM106A-001	OTTHUMT00000453470.4	3266	262aa	OTTHUMP00000276634	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11462	Q96A25
TMEM106A-004	OTTHUMT00000453467.1	1437	262aa	OTTHUMP00000265579	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11462	Q96A25
TMEM106A-003	OTTHUMT00000453468.1	1330	214aa	OTTHUMP00000265580	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74073	-
TMEM106A-002	OTTHUMT00000453469.1	1181	215aa	OTTHUMP00000265581	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS77039	B7Z779
TMEM106A-006	OTTHUMT00000453465.1	913	241aa	OTTHUMP00000265578	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ERE2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TMEM106A-005	OTTHUMT00000453472.2	1624	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TMEM106A-007	OTTHUMT00000453471.1	568	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TMEM106A-008	OTTHUMT00000453466.1	639	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TMEM106A-009	OTTHUMT00000453473.1	571	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,181 bps Translation length: 215 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS77039

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 09/05/2012)

Alternative symbols

CTD-3014M21.3-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 43,211,875-43,218,265 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000536052

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: TMEM106A-002 OTTHUMT00000453469.1

Summary

Transcript-based displays