Transcript: LIN37-001 OTTHUMT00000459109.3

Description

lin-37 homolog (C. elegans)

Location

Chromosome 19: 35,748,361-35,754,519 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000182070 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LIN37-001	OTTHUMT00000459109.3	1150	246aa	OTTHUMP00000268276	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS62642	Q96GY3
LIN37-008	OTTHUMT00000459112.2	532	163aa	OTTHUMP00000268279	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EMY4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LIN37-004	OTTHUMT00000459111.4	291	19aa	OTTHUMP00000268278	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LIN37-013	OTTHUMT00000461741.3	1635	54aa	OTTHUMP00000269457	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIN37-006	OTTHUMT00000459107.2	314	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIN37-012	OTTHUMT00000459108.2	1407	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIN37-002	OTTHUMT00000459106.4	1372	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIN37-010	OTTHUMT00000459114.1	591	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIN37-011	OTTHUMT00000459110.3	561	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,150 bps Translation length: 246 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS62642

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 07/03/2014 (Created on 23/05/2012)

Alternative symbols

AC002398.10-001

Other assemblies

This transcript maps to 35,748,361-35,754,519 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000301159

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LIN37-001 OTTHUMT00000459109.3

Summary

Transcript-based displays