Transcript: COMMD3-BMI1-002 OTTHUMT00000467827.1

Description

COMMD3-BMI1 readthrough

Location

About this transcript

This transcript has 9 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COMMD3-BMI1-001	OTTHUMT00000467824.2	1419	469aa	OTTHUMP00000272339	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS59213	R4GMX3
COMMD3-BMI1-004	OTTHUMT00000467823.2	508	159aa	OTTHUMP00000272338	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
COMMD3-BMI1-005	OTTHUMT00000467825.2	329	110aa	OTTHUMP00000272340	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COMMD3-BMI1-002	OTTHUMT00000467827.1	745	53aa	OTTHUMP00000272341	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COMMD3-BMI1-006	OTTHUMT00000467826.1	605	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
COMMD3-BMI1-003	OTTHUMT00000467828.1	621	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 745 bps Translation length: 53 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 24/10/2012)

Alternative symbols

RP11-573G6.7-002

Annotation Attributes

readthrough [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 22,316,452-22,329,098 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000417470

Curation Method

Manual annotation from Havana