Transcript: LHX1-001 OTTHUMT00000477294.1

Description

LIM homeobox 1

Location

About this transcript

This transcript has 5 exons and is annotated with 23 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LHX1-001	OTTHUMT00000477294.1	3425	406aa	OTTHUMP00000276644	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11316	P48742
LHX1-004	OTTHUMT00000477297.1	512	141aa	OTTHUMP00000276645	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LHX1-005	OTTHUMT00000477293.1	569	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LHX1-002	OTTHUMT00000477295.1	1840	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LHX1-003	OTTHUMT00000477296.1	1364	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,425 bps Translation length: 406 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11316

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/03/2014 (Created on 19/03/2014)

Alternative symbols

AC023315.2-001

Other assemblies

This transcript maps to 36,937,475-36,944,612 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000614239

Curation Method

Manual annotation from Havana