Transcript: IRF2-009 OTTHUMT00000361401.2

Description

interferon regulatory factor 2

Location

Chromosome 4: 184,389,022-184,418,590 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000160606 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
IRF2-001	OTTHUMT00000361393.1	2303	349aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3835	P14316
IRF2-005	OTTHUMT00000361397.6	595	176aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K4DIA5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
IRF2-009	OTTHUMT00000361401.2	586	196aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K4DIA4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
IRF2-007	OTTHUMT00000361399.2	568	160aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6RB08	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
IRF2-004	OTTHUMT00000361396.1	498	137aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D6R9N5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
IRF2-010	OTTHUMT00000361402.2	339	113aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y956	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
IRF2-006	OTTHUMT00000361398.1	591	83aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RED1
IRF2-008	OTTHUMT00000361400.2	731	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
IRF2-003	OTTHUMT00000361395.1	565	No protein	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Loading component

Statistics

Exons: 7 Transcript length: 586 bps Translation length: 196 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 20/08/2009)

Alternative symbols

RP11-326I11.2-009

Remarks

GENCODE experimental pipeline

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 184,389,022-184,418,590 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000505067

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: IRF2-009 OTTHUMT00000361401.2

Summary

Transcript-based displays