Transcript: LRRIQ1-007 OTTHUMT00000398251.2

Description

leucine-rich repeats and IQ motif containing 1

Location

Chromosome 12: 85,036,351-85,047,286 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000166185 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
LRRIQ1-004	OTTHUMT00000388249.2	5394	1722aa	OTTHUMP00000232102	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41816
LRRIQ1-006	OTTHUMT00000388254.1	559	107aa	OTTHUMP00000232106	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRIQ1-007	OTTHUMT00000398251.2	555	164aa	OTTHUMP00000237971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRRIQ1-003	OTTHUMT00000388250.2	432	144aa	OTTHUMP00000232103	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
LRRIQ1-005	OTTHUMT00000388252.3	786	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
LRRIQ1-001	OTTHUMT00000388247.2	4464	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
LRRIQ1-002	OTTHUMT00000388248.1	1890	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 6 Transcript length: 555 bps Translation length: 164 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 15/10/2010)

Alternative symbols

RP11-389G16.1-007

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 85,036,351-85,047,286 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000393212

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LRRIQ1-007 OTTHUMT00000398251.2

Summary

Transcript-based displays