Description
vacuolar protein sorting 53 (yeast)
Location
Chromosome 11: 76,046,226-76,179,647 reverse strand.
About this gene
This gene has 16 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Vps53-001 | OTTMUST00000014053.6 | 2833 | 832aa | OTTMUSP00000006529 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS25060 | Q8CCB4 | |
| Vps53-013 | OTTMUST00000090449.3 | 2645 | 803aa | OTTMUSP00000049626 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PXG9 | |
| Vps53-014 | OTTMUST00000090465.1 | 2209 | 655aa | OTTMUSP00000049637 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Vps53-016 | OTTMUST00000090467.2 | 1259 | 419aa | OTTMUSP00000049644 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PWD1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Vps53-002 | OTTMUST00000014054.2 | 650 | 36aa | OTTMUSP00000049954 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q124 | |
| Vps53-009 | OTTMUST00000090414.2 | 610 | 204aa | OTTMUSP00000049597 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6Z4G7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Vps53-007 | OTTMUST00000090412.6 | 506 | 123aa | OTTMUSP00000049960 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9Q3C3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Vps53-012 | OTTMUST00000090448.1 | 2097 | 334aa | OTTMUSP00000049625 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9Q648 | |
| Vps53-015 | OTTMUST00000090466.1 | 1888 | 547aa | OTTMUSP00000049638 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PYD3 | |
| Vps53-010 | OTTMUST00000090415.23 | 606 | 41aa | OTTMUSP00000049598 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9Q8C4 | |
| Vps53-011 | OTTMUST00000090426.1 | 726 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Vps53-004 | OTTMUST00000014056.1 | 486 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Vps53-003 | OTTMUST00000014055.3 | 478 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Vps53-005 | OTTMUST00000014057.1 | 361 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Vps53-006 | OTTMUST00000074143.1 | 2175 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Vps53-008 | OTTMUST00000090413.1 | 846 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
