| Ptpn22-001 | OTTMUST00000053696.2 | 2743 | 802aa | OTTMUSP00000025543 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS38577 | P29352 | |
| Ptpn22-002 | OTTMUST00000053697.2 | 2757 | 715aa | OTTMUSP00000035950 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9QAS3 | |
| Ptpn22-006 | OTTMUST00000136163.1 | 737 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Ptpn22-005 | OTTMUST00000136166.1 | 570 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Ptpn22-008 | OTTMUST00000136165.1 | 2172 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptpn22-007 | OTTMUST00000136164.1 | 1833 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptpn22-003 | OTTMUST00000053698.1 | 649 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Ptpn22-004 | OTTMUST00000059331.1 | 558 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
