This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Sptbn4 OTTMUSG00000023763

.

Description

spectrin beta, non-erythrocytic 4

Location

Chromosome 7: 27,356,383-27,447,686 reverse strand.

About this gene

This gene has 7 transcripts (splice variants), 13 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sptbn4-001	OTTMUST00000058059.3	8747	2561aa	OTTMUSP00000028078	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21019	E9PX29
Sptbn4-006	OTTMUST00000058064.1	4861	1241aa	OTTMUSP00000028082	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57530	E9PZC2
Sptbn4-005	OTTMUST00000058063.1	4740	1241aa	OTTMUSP00000028081	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57530	E9PZC2
Sptbn4-004	OTTMUST00000058062.1	4724	1241aa	OTTMUSP00000028080	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57530	E9PZC2
Sptbn4-002	OTTMUST00000058060.2	493	128aa	OTTMUSP00000028079	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YWH8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sptbn4-008	OTTMUST00000058058.2	8744	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Sptbn4-003	OTTMUST00000058061.1	369	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

.

Summary

.

.

Gene-based displays