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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
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Gene: Lsm5 OTTMUSG00000039873

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Description

LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Location

Chromosome 6: 56,701,063-56,704,710 reverse strand.

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lsm5-001	OTTMUST00000103626.1	494	91aa	OTTMUSP00000057917	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51788	P62322
Lsm5-005	OTTMUST00000141916.1	416	59aa	OTTMUSP00000074097	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lsm5-002	OTTMUST00000103629.2	274	59aa	OTTMUSP00000074098	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lsm5-003	OTTMUST00000103628.1	366	42aa	OTTMUSP00000057918	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Lsm5-004	OTTMUST00000103627.1	757	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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