Transcript: Lsm5-003 OTTMUST00000103628.1

Description

LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Location

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lsm5-001	OTTMUST00000103626.1	494	91aa	OTTMUSP00000057917	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51788	P62322
Lsm5-005	OTTMUST00000141916.1	416	59aa	OTTMUSP00000074097	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lsm5-002	OTTMUST00000103629.2	274	59aa	OTTMUSP00000074098	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Lsm5-003	OTTMUST00000103628.1	366	42aa	OTTMUSP00000057918	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Lsm5-004	OTTMUST00000103627.1	757	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 366 bps Translation length: 42 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 02/06/2011)

Alternative symbols

RP24-179P9.3-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 56,701,123-56,704,656 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000177144

Curation Method

Manual annotation from Havana