Description
casein alpha s1
Location
Chromosome 5: 87,666,208-87,682,578 forward strand.
About this gene
This gene has 15 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Csn1s1-001 | OTTMUST00000134355.1 | 1411 | 313aa | OTTMUSP00000071256 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS51534 | P19228 | |
Csn1s1-002 | OTTMUST00000134354.1 | 1359 | 294aa | OTTMUSP00000071255 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS80314 | Q91VV1 | |
Csn1s1-007 | OTTMUST00000136993.2 | 433 | 62aa | OTTMUSP00000072206 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0G2JGT8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Csn1s1-005 | OTTMUST00000134356.1 | 1596 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Csn1s1-008 | OTTMUST00000136996.1 | 721 | 130aa | OTTMUSP00000072207 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0G2JEN3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Csn1s1-009 | OTTMUST00000136994.1 | 627 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Csn1s1-004 | OTTMUST00000134357.1 | 1530 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-006 | OTTMUST00000136992.1 | 1328 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-014 | OTTMUST00000136999.1 | 1033 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-003 | OTTMUST00000134353.1 | 801 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-015 | OTTMUST00000137000.1 | 791 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-013 | OTTMUST00000136998.1 | 444 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-010 | OTTMUST00000136995.1 | 349 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-011 | OTTMUST00000136991.1 | 292 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Csn1s1-012 | OTTMUST00000136997.1 | 288 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |