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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (15)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: Lhx1 OTTMUSG00000000972

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Description

LIM homeobox protein 1

Location

Chromosome 11: 84,518,284-84,525,535 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 15 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lhx1-001	OTTMUST00000001910.4	3846	406aa	OTTMUSP00000000925	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS25187	Q569N5
Lhx1-004	OTTMUST00000117042.3	1201	315aa	OTTMUSP00000065478	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WNK8
Lhx1-002	OTTMUST00000001911.6	382	112aa	OTTMUSP00000000926	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0A0MQA9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Lhx1-003	OTTMUST00000103342.2	766	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays