Description
PRP40 pre-mRNA processing factor 40 homolog A (yeast)
Location
Chromosome 2: 53,134,704-53,191,284 reverse strand.
About this gene
This gene has 10 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Prpf40a-001 | OTTMUST00000029595.1 | 7374 | 953aa | OTTMUSP00000013317 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS16038 | Q9R1C7 | |
| Prpf40a-002 | OTTMUST00000029596.3 | 3773 | 911aa | OTTMUSP00000013318 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A2AQW6 | |
| Prpf40a-008 | OTTMUST00000149424.1 | 2833 | 926aa | OTTMUSP00000077543 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| Prpf40a-009 | OTTMUST00000149429.1 | 2227 | 87aa | OTTMUSP00000077548 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Prpf40a-006 | OTTMUST00000149407.1 | 1425 | 100aa | OTTMUSP00000077533 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A2AQW6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Prpf40a-007 | OTTMUST00000149425.1 | 1290 | 129aa | OTTMUSP00000077544 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Prpf40a-010 | OTTMUST00000149430.1 | 1074 | 84aa | OTTMUSP00000077549 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Prpf40a-003 | OTTMUST00000029597.1 | 3065 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Prpf40a-004 | OTTMUST00000029598.1 | 665 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Prpf40a-005 | OTTMUST00000029599.1 | 597 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
