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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Col20a1 OTTMUSG00000019845

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Description

collagen, type XX, alpha 1

Location

Chromosome 2: 180,986,535-181,017,540 forward strand.

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col20a1-001	OTTMUST00000039508.2	4189	1320aa	OTTMUSP00000017651	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50844	Q923P0
Col20a1-002	OTTMUST00000039509.3	3867	1288aa	OTTMUSP00000017652	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Col20a1-004	OTTMUST00000039511.1	633	135aa	OTTMUSP00000017654	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col20a1-003	OTTMUST00000039512.2	441	79aa	OTTMUSP00000017655	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

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Summary

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Gene-based displays