Transcript: Pithd1-001 OTTMUST00000022812.2

Description

novel protein (1110049F12Rik containing a DUF1000 domain)

Location

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pithd1-001	OTTMUST00000022812.2	1700	211aa	OTTMUSP00000010408	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51330	Q8BWR2
Pithd1-007	OTTMUST00000071694.2	465	118aa	OTTMUSP00000036789	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pithd1-002	OTTMUST00000022813.3	359	65aa	OTTMUSP00000036790	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Pithd1-005	OTTMUST00000022816.1	781	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pithd1-003	OTTMUST00000022814.1	242	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Pithd1-004	OTTMUST00000022815.2	626	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pithd1-006	OTTMUST00000022817.1	530	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,700 bps Translation length: 211 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51330

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 31/03/2005)

Alternative symbols

RP23-161N17.10-001

Remarks

1110049F12Rik, C730031H14Rik, 3010001I18Rik

Other assemblies

This transcript maps to 135,975,460-135,987,264 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000105851

Curation Method

Manual annotation from Havana