Transcript: Ccnl2-004 OTTMUST00000064479.1

Description

cyclin L2

Location

About this transcript

This transcript has 10 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ccnl2-001	OTTMUST00000025394.2	2442	518aa	OTTMUSP00000011643	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19042	Q9JJA7
Ccnl2-005	OTTMUST00000064480.1	1232	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Ccnl2-004	OTTMUST00000064479.1	1894	93aa	OTTMUSP00000032024	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6RXL0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ccnl2-002	OTTMUST00000025395.2	4220	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ccnl2-003	OTTMUST00000025396.1	3411	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ccnl2-006	OTTMUST00000064481.1	833	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,894 bps Translation length: 93 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 22/06/2007)

Alternative symbols

RP23-242K15.10-004

Remarks

non-organism_supported

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 155,813,497-155,824,303 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000126346

Curation Method

Manual annotation from Havana