Transcript: Tjp1-006 OTTMUST00000142556.1

Description

tight junction protein 1

Location

About this transcript

This transcript has 5 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tjp1-001	OTTMUST00000039673.1	7049	1745aa	OTTMUSP00000017707	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21338	P39447
Tjp1-004	OTTMUST00000039676.2	6102	1685aa	OTTMUSP00000050574	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52266	B9EHJ3
Tjp1-006	OTTMUST00000142556.1	551	171aa	OTTMUSP00000074362	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RPB2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Tjp1-005	OTTMUST00000142285.1	5938	1128aa	OTTMUSP00000074259	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RPW2
Tjp1-002	OTTMUST00000039674.1	699	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Tjp1-007	OTTMUST00000142557.1	451	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tjp1-003	OTTMUST00000039675.1	385	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 551 bps Translation length: 171 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 21/01/2016 (Created on 12/06/2015)

Alternative symbols

AC122222.1-006

Remarks

CAGE supported TSS

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 65,342,617-65,527,696 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000206228

Curation Method

Manual annotation from Havana