Transcript: Lin7b-006 OTTMUST00000147245.1

Description

lin-7 homolog B (C. elegans)

Location

About this transcript

This transcript has 3 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lin7b-001	OTTMUST00000039918.2	735	207aa	OTTMUSP00000017799	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21239	O88951
Lin7b-006	OTTMUST00000147245.1	388	52aa	OTTMUSP00000076633	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Lin7b-002	OTTMUST00000039919.1	644	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lin7b-005	OTTMUST00000039922.1	405	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lin7b-003	OTTMUST00000039920.1	402	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Lin7b-004	OTTMUST00000039921.1	358	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 388 bps Translation length: 52 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/10/2015 (Created on 20/10/2015)

Alternative symbols

AC151602.1-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 45,367,891-45,369,233 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000210865

Curation Method

Manual annotation from Havana