Transcript: Rad18-005 OTTMUST00000042064.2

Description

RAD18 homolog (S. cerevisiae)

Location

Chromosome 6: 112,644,484-112,696,633 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000017314 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rad18-001	OTTMUST00000042060.1	2577	509aa	OTTMUSP00000018917	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39589	Q9QXK2
Rad18-002	OTTMUST00000042061.1	2577	556aa	OTTMUSP00000018918	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51870	E9Q392
Rad18-006	OTTMUST00000042065.1	2220	449aa	OTTMUSP00000018919	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z733
Rad18-007	OTTMUST00000042066.1	2136	428aa	OTTMUSP00000018920	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z734
Rad18-008	OTTMUST00000042067.2	724	241aa	OTTMUSP00000018921	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Rad18-005	OTTMUST00000042064.2	1496	309aa	OTTMUSP00000065199	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	W4VSP9
Rad18-003	OTTMUST00000042062.2	3535	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Rad18-004	OTTMUST00000042063.1	2004	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,496 bps Translation length: 309 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 24/01/2013 (Created on 05/06/2006)

Alternative symbols

RP24-350P11.1-005

Other assemblies

This transcript maps to 112,644,484-112,696,633 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000156063

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Rad18-005 OTTMUST00000042064.2

Summary

Transcript-based displays