Transcript: Syp-003 OTTMUST00000043004.2

Description

synaptophysin

Location

About this transcript

This transcript has 4 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Syp-001	OTTMUST00000043002.1	2591	314aa	OTTMUSP00000019333	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29967	Q62277
Syp-003	OTTMUST00000043004.2	494	165aa	OTTMUSP00000019334	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6VR28	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Syp-004	OTTMUST00000043005.1	433	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Syp-002	OTTMUST00000043003.1	2843	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Syp-005	OTTMUST00000043006.1	430	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Syp-006	OTTMUST00000043007.1	417	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 494 bps Translation length: 165 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 23/06/2006)

Alternative symbols

RP23-54C14.4-003

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 7,638,722-7,644,294 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000128890

Curation Method

Manual annotation from Havana