Transcript: Smg9-007 OTTMUST00000074746.2

Description

novel protein (1500002O20Rik)

Location

Chromosome 7: 24,414,975-24,420,930 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022275 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smg9-001	OTTMUST00000053054.1	2242	520aa	OTTMUSP00000025208	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20949	Q9DB90
Smg9-004	OTTMUST00000053057.2	784	210aa	OTTMUSP00000025209	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Smg9-007	OTTMUST00000074746.2	354	118aa	OTTMUSP00000039029	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Smg9-002	OTTMUST00000053055.1	1620	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smg9-006	OTTMUST00000053059.1	1103	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smg9-005	OTTMUST00000053058.1	833	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smg9-003	OTTMUST00000053056.1	649	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 354 bps Translation length: 118 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 30/11/2007)

Alternative symbols

AC159140.1-007

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 24,414,975-24,420,930 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000123188

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Smg9-007 OTTMUST00000074746.2

Summary

Transcript-based displays