Transcript: AC123684.1-001 OTTMUST00000053802.1

Description

novel protein similar to human chromosome 1 open reading frame 52

Location

Chromosome 3: 145,938,014-145,944,829 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022483 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AC123684.1-001	OTTMUST00000053802.1	1547	180aa	OTTMUSP00000025603	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17898	Q9CWU4
AC123684.1-007	OTTMUST00000120651.1	724	83aa	OTTMUSP00000066737	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC123684.1-006	OTTMUST00000120652.1	540	23aa	OTTMUSP00000066738	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC123684.1-005	OTTMUST00000120649.1	1480	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
AC123684.1-002	OTTMUST00000053803.2	1644	98aa	OTTMUSP00000041805	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
AC123684.1-004	OTTMUST00000053805.2	514	55aa	OTTMUSP00000041806	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AC123684.1-003	OTTMUST00000053804.1	545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AC123684.1-008	OTTMUST00000120650.1	338	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 1,547 bps Translation length: 180 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17898

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/11/2014 (Created on 18/01/2007)

Other assemblies

This transcript maps to 145,938,014-145,944,829 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000039571

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AC123684.1-001 OTTMUST00000053802.1

Summary

Transcript-based displays