Transcript: Ift88-001 OTTMUST00000065922.1

Description

intraflagellar transport 88 homolog (Chlamydomonas)

Location

About this transcript

This transcript has 26 exons and is annotated with 38 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ift88-001	OTTMUST00000065922.1	3088	825aa	OTTMUSP00000032923	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36937	G3X9Z7
Ift88-005	OTTMUST00000089922.1	686	175aa	OTTMUSP00000049195	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ift88-003	OTTMUST00000065939.1	562	54aa	OTTMUSP00000032933	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Ift88-002	OTTMUST00000065923.1	4226	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ift88-004	OTTMUST00000065940.1	667	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 26 Transcript length: 3,088 bps Translation length: 825 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36937

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 12/07/2007)

Alternative symbols

RP23-143J5.1-001

Other assemblies

This transcript maps to 57,424,062-57,517,936 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000122063

Curation Method

Manual annotation from Havana