Transcript: Bud13-004 OTTMUST00000084790.1

Description

BUD13 homolog (yeast)

Location

About this transcript

This transcript has 4 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Bud13-001	OTTMUST00000071090.2	2539	637aa	OTTMUSP00000036354	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23145	Q8R149
Bud13-006	OTTMUST00000154967.1	978	185aa	OTTMUSP00000080047	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Bud13-004	OTTMUST00000084790.1	825	74aa	OTTMUSP00000045739	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Bud13-005	OTTMUST00000154966.1	436	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Bud13-002	OTTMUST00000071091.1	3413	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Bud13-003	OTTMUST00000071092.1	583	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 825 bps Translation length: 74 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 02/10/2008)

Alternative symbols

RP23-433B2.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 46,288,247-46,298,783 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000124887

Curation Method

Manual annotation from Havana