Transcript: Ppid-004 OTTMUST00000072903.2

Description

peptidylprolyl isomerase D (cyclophilin D)

Location

About this transcript

This transcript has 4 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ppid-001	OTTMUST00000072900.1	1752	370aa	OTTMUSP00000037639	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17417	Q9CR16
Ppid-004	OTTMUST00000072903.2	353	73aa	OTTMUSP00000070185	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0A6YW70	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ppid-003	OTTMUST00000072902.1	407	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ppid-002	OTTMUST00000072901.1	3777	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ppid-005	OTTMUST00000072904.1	546	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ppid-006	OTTMUST00000072905.1	512	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 353 bps Translation length: 73 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 31/07/2014 (Created on 25/10/2007)

Alternative symbols

AC113945.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 79,593,689-79,597,761 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159505

Curation Method

Manual annotation from Havana