Transcript: P4ha3-005 OTTMUST00000145250.1

Description

procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III

Location

About this transcript

This transcript has 9 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
P4ha3-001	OTTMUST00000076665.1	2361	542aa	OTTMUSP00000040397	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21496	H7BX23
P4ha3-004	OTTMUST00000076668.2	1884	388aa	OTTMUSP00000040399	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6R2A2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
P4ha3-003	OTTMUST00000076667.1	2403	65aa	OTTMUSP00000040398	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
P4ha3-005	OTTMUST00000145250.1	1215	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
P4ha3-002	OTTMUST00000076666.1	1342	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,215 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/08/2015 (Created on 20/08/2015)

Alternative symbols

AC122269.1-005

Annotation Attributes

RNA-Seq supported only [Definitions]

Other assemblies

This transcript maps to 100,301,581-100,319,237 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000208565

Curation Method

Manual annotation from Havana