Transcript: Oaz2-001 OTTMUST00000079080.2

Description

ornithine decarboxylase antizyme 2

Location

Chromosome 9: 65,676,548-65,690,300 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000031899 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Oaz2-001	OTTMUST00000079080.2	1843	189aa	OTTMUSP00000062513	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57683	O08608
Oaz2-007	OTTMUST00000079086.2	865	121aa	OTTMUSP00000062516	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QPT5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Oaz2-002	OTTMUST00000079081.2	700	130aa	OTTMUSP00000062515	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QJW9
Oaz2-004	OTTMUST00000079083.2	643	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Oaz2-005	OTTMUST00000079084.2	393	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Oaz2-003	OTTMUST00000079082.1	1095	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,843 bps Translation length: 189 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57683

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 29/01/2014 (Created on 12/03/2008)

Alternative symbols

RP24-289L14.1-001

Remarks

A ribosomal frameshift occurs between the codons for Ser-32 and Asp-33. An autoregulatory mechanism enables modulation of frameshifting according to the cellular concentration of polyamines

[PMID:17332016]: "Ribosomes synthesizing antizyme start in one ORF and at the codon 5' adjacent to its stop codon, shift +1 to a second and partially overlapping ORF which encodes most of the protein. The ribosomal frameshifting is a sensor and effector of an autoregulatory circuit which is conserved in animals, fungi and protists. Stimulatory signals encoded 5' and 3' of the shift site act to program the frameshifting"; built with 1bp gap in exon 2 to represent the frameshift event

Other assemblies

This transcript maps to 65,676,548-65,690,300 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000153700

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Oaz2-001 OTTMUST00000079080.2

Summary

Transcript-based displays