Transcript: Hcfc2-004 OTTMUST00000080950.1

Description

host cell factor C2

Location

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Hcfc2-001	OTTMUST00000080882.4	3422	722aa	OTTMUSP00000043130	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS36014	G5E837
Hcfc2-002	OTTMUST00000080883.3	2887	261aa	OTTMUSP00000043131	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hcfc2-004	OTTMUST00000080950.1	779	145aa	OTTMUSP00000043182	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Hcfc2-003	OTTMUST00000080944.2	407	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 779 bps Translation length: 145 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 08/04/2008)

Alternative symbols

RP24-200F4.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 82,699,211-82,712,230 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000162422

Curation Method

Manual annotation from Havana