Transcript: Slc38a6-002 OTTMUST00000081782.1

Description

solute carrier family 38, member 6

Location

Chromosome 12: 73,286,857-73,327,878 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000032835 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Slc38a6-001	OTTMUST00000081781.1	3032	457aa	OTTMUSP00000043793	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49088	G3UVW3
Slc38a6-005	OTTMUST00000081785.1	3927	125aa	OTTMUSP00000043797	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YUW5
Slc38a6-004	OTTMUST00000081784.2	1546	70aa	OTTMUSP00000043796	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F2Z3Y3
Slc38a6-003	OTTMUST00000081783.1	589	131aa	OTTMUSP00000043795	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3USV8
Slc38a6-006	OTTMUST00000081786.3	359	114aa	OTTMUSP00000048476	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CY99	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Slc38a6-002	OTTMUST00000081782.1	2244	131aa	OTTMUSP00000043794	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	Q3USV8
Slc38a6-008	OTTMUST00000081788.1	767	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Slc38a6-007	OTTMUST00000081787.1	725	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 2,244 bps Translation length: 131 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/07/2012 (Created on 20/05/2008)

Alternative symbols

RP23-386L9.1-002

Other assemblies

This transcript maps to 73,286,857-73,327,878 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000058139

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Slc38a6-002 OTTMUST00000081782.1

Summary

Transcript-based displays