Transcript: Kdelc1-001 OTTMUST00000085981.1

Description

KDEL (Lys-Asp-Glu-Leu) containing 1

Location

Chromosome 1: 44,106,546-44,118,808 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034049 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Kdelc1-001	OTTMUST00000085981.1	2359	502aa	OTTMUSP00000046494	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14929	Q9JHP7
Kdelc1-005	OTTMUST00000085985.1	1765	432aa	OTTMUSP00000046495	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Kdelc1-009	OTTMUST00000121131.1	2040	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Kdelc1-004	OTTMUST00000085984.1	389	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Kdelc1-006	OTTMUST00000086001.1	864	137aa	OTTMUSP00000046511	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RE32
Kdelc1-002	OTTMUST00000085982.1	2085	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Kdelc1-003	OTTMUST00000085983.1	2031	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,359 bps Translation length: 502 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS14929

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 23/12/2013 (Created on 05/01/2009)

Alternative symbols

AC123800.3-001

Other assemblies

This transcript maps to 44,106,546-44,118,808 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000065767

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Kdelc1-001 OTTMUST00000085981.1

Summary

Transcript-based displays