Transcript: Exoc5-001 OTTMUST00000087772.1

Description

exocyst complex component 5

Location

Chromosome 14: 49,012,146-49,066,653 reverse strand.

About this transcript

This transcript has 18 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034599 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Exoc5-001	OTTMUST00000087772.1	4643	708aa	OTTMUSP00000047784	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49474	Q3TPX4
Exoc5-003	OTTMUST00000087774.1	2582	643aa	OTTMUSP00000047785	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PZ92
Exoc5-004	OTTMUST00000087775.2	694	200aa	OTTMUSP00000047786	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CYX2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Exoc5-006	OTTMUST00000087777.1	880	39aa	OTTMUSP00000047787	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6SMI5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Exoc5-002	OTTMUST00000087773.1	4429	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Exoc5-007	OTTMUST00000087778.1	749	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Exoc5-005	OTTMUST00000087776.1	559	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 4,643 bps Translation length: 708 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49474

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 04/04/2013 (Created on 26/05/2009)

Alternative symbols

RP23-268P13.1-001

Remarks

6330415D17Rik

C430042H16Rik

F630022H07Rik

F630218F24Rik

F830218D24Rik

I1C0034J05Rik

I830001O07Rik

I830059L04Rik

NP_997097

Other assemblies

This transcript maps to 49,012,146-49,066,653 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000162175

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Exoc5-001 OTTMUST00000087772.1

Summary

Transcript-based displays