Transcript: Scyl3-002 OTTMUST00000088469.1

Description

SCY1-like 3 (S. cerevisiae)

Location

About this transcript

This transcript has 14 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Scyl3-001	OTTMUST00000088468.2	4368	735aa	OTTMUSP00000048211	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15430	Q9DBQ7
Scyl3-003	OTTMUST00000088470.1	3718	722aa	OTTMUSP00000048213	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS69967	-
Scyl3-005	OTTMUST00000088472.1	545	60aa	OTTMUSP00000048214	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Scyl3-002	OTTMUST00000088469.1	4336	99aa	OTTMUSP00000048212	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Scyl3-004	OTTMUST00000088471.1	516	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Scyl3-006	OTTMUST00000088473.1	1825	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 4,336 bps Translation length: 99 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/10/2013 (Created on 21/07/2009)

Alternative symbols

RP23-376B19.1-002

Other assemblies

This transcript maps to 163,929,805-163,955,109 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000162234

Curation Method

Manual annotation from Havana