Transcript: Smpd5-002 OTTMUST00000092660.2

Description

sphingomyelin phosphodiesterase 5

Location

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smpd5-001	OTTMUST00000092659.2	1823	483aa	OTTMUSP00000055101	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56988	D6MZJ6
Smpd5-002	OTTMUST00000092660.2	739	117aa	OTTMUSP00000055102	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UXH6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Smpd5-003	OTTMUST00000092661.2	1101	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smpd5-004	OTTMUST00000092662.1	344	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 739 bps Translation length: 117 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 27/05/2010)

Alternative symbols

RP24-127H11.3-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 76,294,968-76,296,252 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000171192

Curation Method

Manual annotation from Havana