Transcript: Trim39-002 OTTMUST00000096146.1

Description

tripartite motif-containing 39

Location

About this transcript

This transcript has 7 exons and is annotated with 27 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Trim39-002	OTTMUST00000096146.1	3204	488aa	OTTMUSP00000053682	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37611	E9QLN4
Trim39-001	OTTMUST00000096147.1	3085	488aa	OTTMUSP00000053683	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37611	E9QLN4
Trim39-003	OTTMUST00000096148.1	2914	496aa	OTTMUSP00000053684	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UWI0
Trim39-004	OTTMUST00000096145.1	2974	60aa	OTTMUSP00000053681	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UX29	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Trim39-006	OTTMUST00000096149.1	1465	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Trim39-007	OTTMUST00000096196.1	633	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Trim39-005	OTTMUST00000096150.1	4718	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 3,204 bps Translation length: 488 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37611

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 31/01/2011)

Alternative symbols

RP24-358N7.4-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 36,258,873-36,271,567 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000113706

Curation Method

Manual annotation from Havana