Transcript: Ryk-003 OTTMUST00000109960.3

Description

receptor-like tyrosine kinase

Location

About this transcript

This transcript has 15 exons and is annotated with 24 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ryk-001	OTTMUST00000109961.5	2852	591aa	OTTMUSP00000061268	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57696	H9H9R6
Ryk-003	OTTMUST00000109960.3	2505	594aa	OTTMUSP00000061267	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40747	Q01887
Ryk-002	OTTMUST00000109962.1	3072	62aa	OTTMUSP00000061269	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BKH8
Ryk-006	OTTMUST00000110167.1	386	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ryk-005	OTTMUST00000110168.2	870	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ryk-004	OTTMUST00000109994.1	551	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,505 bps Translation length: 594 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40747

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 07/06/2016 (Created on 05/07/2011)

Alternative symbols

RP23-274G21.1-003

Remarks

Burset M, Seledtsov IA, Solovyev VV

NAGNAG splice site

non canonical other

Nucleic Acids Res. 2000, Nov 1; 28(21): 4364-75. Analysis of canonical and non-canonical splice sites in mammalian genomes

Other assemblies

This transcript maps to 102,834,917-102,907,542 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000175883

Curation Method

Manual annotation from Havana