Transcript: RP24-458M20.2-004 OTTMUST00000119431.1

Description

novel protein, orthologue of human chromosome 11 open reading frame 48 C11orf48 (1810009A15Rik)

Location

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
RP24-458M20.2-001	OTTMUST00000119384.1	806	123aa	OTTMUSP00000066435	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29555	Q9D937
RP24-458M20.2-002	OTTMUST00000119385.1	2138	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
RP24-458M20.2-004	OTTMUST00000119431.1	500	79aa	OTTMUSP00000066441	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RP24-458M20.2-005	OTTMUST00000119433.1	830	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RP24-458M20.2-006	OTTMUST00000119432.1	793	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RP24-458M20.2-003	OTTMUST00000119430.1	784	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 500 bps Translation length: 79 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 23/10/2013 (Created on 23/10/2013)

Other assemblies

This transcript maps to 8,888,915-8,890,546 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000185488

Curation Method

Manual annotation from Havana