Transcript: Rrh-005 OTTMUST00000135449.1

Description

retinal pigment epithelium derived rhodopsin homolog

Location

About this transcript

This transcript has 1 exon.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rrh-001	OTTMUST00000135446.3	1250	337aa	OTTMUSP00000071670	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38633	O35214
Rrh-004	OTTMUST00000135448.1	1506	379aa	OTTMUSP00000071671	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q80XL3
Rrh-002	OTTMUST00000135445.2	1106	240aa	OTTMUSP00000071669	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0G2JF76
Rrh-007	OTTMUST00000135452.1	763	130aa	OTTMUSP00000071673	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JFN6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rrh-003	OTTMUST00000135447.1	1759	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Rrh-006	OTTMUST00000135453.1	1207	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Rrh-005	OTTMUST00000135449.1	3005	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 1 Transcript length: 3,005 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 21/10/2014 (Created on 21/10/2014)

Alternative symbols

RP23-174G7.2-005

Other assemblies

This transcript maps to 129,819,454-129,822,458 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000196281

Curation Method

Manual annotation from Havana