Transcript: Tubgcp2-007 OTTMUST00000148171.1

Description

tubulin, gamma complex associated protein 2

Location

Chromosome 7: 140,031,020-140,036,332 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000060571 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Tubgcp2-001	OTTMUST00000148166.1	2960	905aa	OTTMUSP00000077049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21960	Q921G8
Tubgcp2-006	OTTMUST00000148168.1	3060	900aa	OTTMUSP00000077050	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GR08	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Tubgcp2-007	OTTMUST00000148171.1	646	149aa	OTTMUSP00000077052	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GRD4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Tubgcp2-002	OTTMUST00000148167.1	2127	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Tubgcp2-005	OTTMUST00000148164.1	2837	205aa	OTTMUSP00000077048	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GRD0
Tubgcp2-008	OTTMUST00000148170.1	565	83aa	OTTMUSP00000077051	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GS25
Tubgcp2-004	OTTMUST00000148165.1	3341	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tubgcp2-003	OTTMUST00000148169.1	2610	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 646 bps Translation length: 149 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 13/11/2015 (Created on 13/11/2015)

Alternative symbols

RP23-182C11.2-007

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 140,031,020-140,036,332 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000209574

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Tubgcp2-007 OTTMUST00000148171.1

Summary

Transcript-based displays