Transcript: Brf2-004 OTTMUST00000149057.1

Description

BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like

Location

Chromosome 8: 27,124,612-27,128,623 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000060988 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Brf2-001	OTTMUST00000149054.1	1899	420aa	OTTMUSP00000077401	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22211	A0A0R4J0C6
Brf2-007	OTTMUST00000149055.1	478	54aa	OTTMUSP00000077402	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Brf2-002	OTTMUST00000149059.1	1688	85aa	OTTMUSP00000077404	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GRY1
Brf2-004	OTTMUST00000149057.1	790	85aa	OTTMUSP00000077403	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GRY1
Brf2-003	OTTMUST00000149060.1	448	85aa	OTTMUSP00000077405	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GRY1
Brf2-005	OTTMUST00000149056.1	620	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Brf2-006	OTTMUST00000149058.1	794	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 790 bps Translation length: 85 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/12/2015 (Created on 10/12/2015)

Alternative symbols

RP24-247M18.2-004

Other assemblies

This transcript maps to 27,124,612-27,128,623 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000211151

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Brf2-004 OTTMUST00000149057.1

Summary

Transcript-based displays