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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: SOGA1 OTTHUMG00000032395

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Description

suppressor of glucose, autophagy associated 1

Synonyms

SOGA, dJ132F21.1, FLJ44670

Location

Chromosome 20: 36,777,442-36,863,686 reverse strand.

VEGA68:CM000682.2

About this gene

This gene has 4 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SOGA1-005	OTTHUMT00000276635.1	14371	1661aa	OTTHUMP00000178800	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54459	-
SOGA1-003	OTTHUMT00000276634.3	3703	1016aa	OTTHUMP00000274111	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46598	X6R3R3
SOGA1-001	OTTHUMT00000079040.6	4478	1275aa	OTTHUMP00000030870	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YDM2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SOGA1-004	OTTHUMT00000079057.2	802	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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Gene-based displays