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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
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- Orthologues
- Alt. alleles
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Gene: SYNGR1 OTTHUMG00000030978

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Description

synaptogyrin 1

Location

Chromosome 22: 39,349,925-39,385,588 forward strand.

VEGA68:CM000684.2

About this gene

This gene has 7 transcripts (splice variants), 3 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYNGR1-001	OTTHUMT00000075866.2	4391	233aa	OTTHUMP00000028972	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13989	O43759
SYNGR1-002	OTTHUMT00000259132.2	1361	191aa	OTTHUMP00000165911	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13990	-
SYNGR1-005	OTTHUMT00000259135.2	1295	192aa	OTTHUMP00000165912	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13991	-
SYNGR1-007	OTTHUMT00000321215.1	564	169aa	OTTHUMP00000199080	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B5MCD7
SYNGR1-006	OTTHUMT00000259136.1	497	118aa	OTTHUMP00000165913	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2A283
SYNGR1-003	OTTHUMT00000259133.2	928	144aa	OTTHUMP00000199081	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WCE4
SYNGR1-004	OTTHUMT00000259134.1	1999	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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