Transcript: CFAP47-001 OTTHUMT00000056217.4

Description

cilia and flagella associated protein 47

Location

About this transcript

This transcript has 13 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
CFAP47-002	OTTHUMT00000480917.2	9943	3187aa	OTTHUMP00000278410	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS83464
CFAP47-003	OTTHUMT00000056216.2	3608	976aa	OTTHUMP00000023133	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14237
CFAP47-006	OTTHUMT00000480918.2	269	90aa	OTTHUMP00000278411	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
CFAP47-004	OTTHUMT00000286478.2	3468	754aa	OTTHUMP00000233739	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
CFAP47-001	OTTHUMT00000056217.4	2298	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
CFAP47-005	OTTHUMT00000056222.2	792	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 13 Transcript length: 2,298 bps

Class

Putative processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 20/08/2014 (Created on 13/06/2003)

Alternative symbols

RP13-11B7.1-001

Remarks

novel protein (FLJ36601)

upstream uORF

Other assemblies

This transcript maps to 36,035,791-36,145,070 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000378660

Curation Method

Manual annotation from Havana