Transcript: CFAP47-002 OTTHUMT00000480917.2

Description

cilia and flagella associated protein 47

Location

About this transcript

This transcript has 64 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
CFAP47-002	OTTHUMT00000480917.2	9943	3187aa	OTTHUMP00000278410	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS83464
CFAP47-003	OTTHUMT00000056216.2	3608	976aa	OTTHUMP00000023133	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14237
CFAP47-006	OTTHUMT00000480918.2	269	90aa	OTTHUMP00000278411	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
CFAP47-004	OTTHUMT00000286478.2	3468	754aa	OTTHUMP00000233739	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
CFAP47-001	OTTHUMT00000056217.4	2298	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
CFAP47-005	OTTHUMT00000056222.2	792	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 64 Transcript length: 9,943 bps Translation length: 3,187 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS83464

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/02/2015 (Created on 20/08/2014)

Alternative symbols

RP13-11B7.1-002

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

Other assemblies

This transcript maps to 35,919,734-36,385,319 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000378653

Curation Method

Manual annotation from Havana