This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: RP24-458M20.2 OTTMUSG00000045539

.

Description

novel protein, orthologue of human chromosome 11 open reading frame 48 C11orf48 (1810009A15Rik)

Location

Chromosome 19: 8,888,853-8,892,627 forward strand.

About this gene

This gene has 6 transcripts (splice variants), 3 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP24-458M20.2-001	OTTMUST00000119384.1	806	123aa	OTTMUSP00000066435	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29555	Q9D937
RP24-458M20.2-002	OTTMUST00000119385.1	2138	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
RP24-458M20.2-004	OTTMUST00000119431.1	500	79aa	OTTMUSP00000066441	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RP24-458M20.2-005	OTTMUST00000119433.1	830	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RP24-458M20.2-006	OTTMUST00000119432.1	793	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RP24-458M20.2-003	OTTMUST00000119430.1	784	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays