Transcript: Mmp16-002 OTTMUST00000010498.3

Description

matrix metalloproteinase 16

Location

About this transcript

This transcript has 12 exons and is annotated with 26 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Mmp16-001	OTTMUST00000010497.1	5011	607aa	OTTMUSP00000004975	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17989	Q9WTR0
Mmp16-004	OTTMUST00000010500.3	853	127aa	OTTMUSP00000004977	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AVG8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp16-005	OTTMUST00000010501.2	601	174aa	OTTMUSP00000004978	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AVH0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp16-002	OTTMUST00000010498.3	3470	415aa	OTTMUSP00000065405	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GXD8
Mmp16-003	OTTMUST00000010499.2	3797	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Mmp16-006	OTTMUST00000010502.2	729	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 3,470 bps Translation length: 415 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 05/02/2013 (Created on 03/09/2004)

Alternative symbols

RP23-120P2.1-002

Remarks

6030454J05Rik

Other assemblies

This transcript maps to 17,852,893-18,117,457 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000183662

Curation Method

Manual annotation from Havana