Transcript: Mmp16-003 OTTMUST00000010499.2

Description

matrix metalloproteinase 16

Location

About this transcript

This transcript has 5 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Mmp16-001	OTTMUST00000010497.1	5011	607aa	OTTMUSP00000004975	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17989	Q9WTR0
Mmp16-004	OTTMUST00000010500.3	853	127aa	OTTMUSP00000004977	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AVG8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp16-005	OTTMUST00000010501.2	601	174aa	OTTMUSP00000004978	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AVH0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp16-002	OTTMUST00000010498.3	3470	415aa	OTTMUSP00000065405	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GXD8
Mmp16-003	OTTMUST00000010499.2	3797	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Mmp16-006	OTTMUST00000010502.2	729	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,797 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/02/2013 (Created on 03/09/2004)

Alternative symbols

RP23-120P2.1-003

Remarks

B230346J01Rik

E130112O15Rik

Other assemblies

This transcript maps to 17,853,593-18,054,681 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000133416

Curation Method

Manual annotation from Havana